4-Pyridoxic acid

Common Name

4-Pyridoxic acid Description

4-Pyridoxic acid is the catabolic product of vitamin B6 (also known as pyridoxine, pyridoxal and pyradoxamine) which is excreted in the urine. Urinary levels of 4-pyridoxic acid are lower in females than in males and will be reduced in persons with riboflavin deficiency. 4-Pyridoxic acid is formed by the action of aldehyde oxidase I (an endogenous enzyme) and by microbial enzymes (pyridoxal 4-dehydrogenase), an NAD-dependent aldehyde dehydrogenase. 4-pyridoxic acid can be further broken down by the gut microflora via 4-pyridoxic acid dehydrogenase. This enzyme catalyzes the four electron oxidation of 4-pyridoxic acid to 3-hydroxy-2-methylpyridine-4,5-dicarboxylate, using nicotinamide adenine dinucleotide as a cofactor. Structure

Synonyms

Value Source 2-Methyl-3-hydroxy-4-carboxy-5-hydroxymethylpyridineChEBI 3-Hydroxy-5-(hydroxymethyl)-2-methylisonicotinic acidChEBI 4-PyridoxateChEBI 4-Pyridoxinecarboxylic acidChEBI 4-Pyridoxinic acidChEBI 4-Pyridoxylic acidChEBI Pyridoxic acidChEBI 3-Hydroxy-5-(hydroxymethyl)-2-methylisonicotinateGenerator 4-PyridoxinecarboxylateGenerator 4-PyridoxinateGenerator 4-PyridoxylateGenerator PyridoxateGenerator 3-Hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxylateHMDB 3-Hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxylic acidHMDB 3-Hydroxy-5-(hydroxymethyl)-2-methyl-isonicotinateHMDB 3-Hydroxy-5-(hydroxymethyl)-2-methyl-isonicotinic acidHMDB 3-Hydroxy-5-hydroxymethyl-2-methyl-isonicotinateHMDB 3-Hydroxy-5-hydroxymethyl-2-methyl-isonicotinic acidHMDB 3-Hydroxy-5-hydroxymethyl-2-methyl-isonicotinsaeureHMDB 4-PyridoxinsaeureHMDB 4 Pyridoxinic acidMeSH Pyridoxinecarboxylic acidMeSH 4 Pyridoxylic acidMeSH 4 Pyridoxic acidMeSH

Chemical Formlia

C8H9NO4 Average Molecliar Weight

183.1614 Monoisotopic Molecliar Weight

183.053157781 IUPAC Name

3-hydroxy-5-(hydroxymethyl)-2-methylpyridine-4-carboxylic acid Traditional Name

pyridoxic acid CAS Registry Number

82-82-6 SMILES

CC1=NC=C(CO)C(C(O)=O)=C1O

InChI Identifier

InChI=1S/C8H9NO4/c1-4-7(11)6(8(12)13)5(3-10)2-9-4/h2,10-11H,3H2,1H3,(H,12,13)

InChI Key

HXACOUQIXZGNBF-UHFFFAOYSA-N Chemical Taxonomy Description

This compound belongs to the class of chemical entities known as pyridinecarboxylic acids. These are compounds containing a pyridine ring bearing a carboxylic acid group. Kingdom

Chemical entities Super Class

Organic compounds Class

Organoheterocyclic compounds Sub Class

Pyridines and derivatives Direct Parent

Pyridinecarboxylic acids Alternative Parents

  • Methylpyridines
  • Hydroxypyridines
  • Vinylogous acids
  • Heteroaromatic compounds
  • Monocarboxylic acids and derivatives
  • Carboxylic acids
  • Azacyclic compounds
  • Primary alcohols
  • Organopnictogen compounds
  • Organonitrogen compounds
  • Organic oxides
  • Hydrocarbon derivatives
  • Aromatic alcohols
  • Substituents

  • Pyridine carboxylic acid
  • Hydroxypyridine
  • Methylpyridine
  • Vinylogous acid
  • Heteroaromatic compound
  • Azacycle
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Alcohol
  • Aromatic alcohol
  • Organic nitrogen compound
  • Primary alcohol
  • Organooxygen compound
  • Organonitrogen compound
  • Organopnictogen compound
  • Organic oxide
  • Aromatic heteromonocyclic compound
  • Molecliar Framework

    Aromatic heteromonocyclic compounds External Descriptors

  • monohydroxypyridine (CHEBI:17405 )
  • methylpyridines (CHEBI:17405 )
  • vitamin B6 (CHEBI:17405 )
  • hydroxymethylpyridine (CHEBI:17405 )
  • Ontology Status

    Detected and Quantified Origin

  • Endogenous
  • Biofunction

    Not Available Application

    Not Available Cellliar locations

  • Cytoplasm
  • Extracellliar
  • Physical Properties State

    Solid Experimental Properties

    Property Value Reference Melting Point247 – 248 °CNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility8.71 mg/mLALOGPS logP-0.08ALOGPS logP-0.75ChemAxon logS-1.3ALOGPS pKa (Strongest Acidic)2.55ChemAxon pKa (Strongest Basic)4.09ChemAxon Physiological Charge-1ChemAxon Hydrogen Acceptor Count5ChemAxon Hydrogen Donor Count3ChemAxon Polar Surface Area90.65 Å2ChemAxon Rotatable Bond Count2ChemAxon Refractivity44.55 m3·mol-1ChemAxon Polarizability17.19 Å3ChemAxon Number of Rings1ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key GC-MS

    GC-MS Spectrum – GC-MS (3 TMS)splash10-0600-1594000000-399002a1b2bc22455c9fView in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ (API3000, Applied Biosystems) 10V, Positivesplash10-001i-0900000000-4f9434fb63b0ad0ce994View in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ (API3000, Applied Biosystems) 20V, Positivesplash10-014i-0900000000-99753fc7dd56422dd423View in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ (API3000, Applied Biosystems) 30V, Positivesplash10-0002-0900000000-6e2e1f60d8bebc0b3340View in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ (API3000, Applied Biosystems) 40V, Positivesplash10-0002-6900000000-8c038db01c62f9d4e87bView in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ (API3000, Applied Biosystems) 50V, Positivesplash10-014i-9200000000-a94133cf31fe1f8b7938View in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QTOF (UPLC Q-Tof Premier, Waters) , Positivesplash10-00kb-0900000000-d57234d89d8c011abfb4View in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QTOF (UPLC Q-Tof Premier, Waters) 30V, Positivesplash10-00kb-7900000000-a99b8437514399d65abaView in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QTOF (UPLC Q-Tof Premier, Waters) , Negativesplash10-052r-0900000000-725f61f22b0bc1a28b93View in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-ITFT , negativesplash10-000i-0900000000-79e29b063e250dd7037bView in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-TOF , negativesplash10-000i-0900000000-f82707706c2653c46393View in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ , positivesplash10-014i-0900000000-2c70b549625fa141234aView in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ , positivesplash10-0002-0900000000-2a37bda24c0b0f98132bView in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ , positivesplash10-0002-6900000000-d3f955b006cc32330eddView in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ , positivesplash10-014i-9200000000-8f0fa7a53eb7325318baView in MoNA LC-MS/MS

    LC-MS/MS Spectrum – , positivesplash10-014i-0900000000-df0aa00e8733225ac266View in MoNA 1D NMR

    1H NMR SpectrumNot Available 2D NMR

    [1H,13C] 2D NMR SpectrumNot Available

    Biological Properties Cellliar Locations

  • Cytoplasm
  • Extracellliar
  • Biofluid Locations

  • Blood
  • Saliva
  • Urine
  • Tissue Location

  • Bladder
  • Erythrocyte
  • Kidney
  • Liver
  • Pathways

    Name SMPDB Link KEGG Link HypophosphatasiaSMP00503Not Available Vitamin B6 MetabolismSMP00017map00750

    Normal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodDetected and Quantified0.027 (0.0062-3.14) uMAdlit (>18 years old)BothNormal

  • 15450810
  • details BloodDetected and Quantified0.040 +/- 0.007 uMAdlit (>18 years old)BothNormal

  • Geigy Scientific …
  • details BloodDetected and Quantified0.0071 +/- 0.005 uMAdlit (>18 years old)FemaleNormal

  • 11068702
  • details BloodDetected and Quantified0.0097 +/- 0.00665 uMAdlit (>18 years old)MaleNormal

  • 11068702
  • details SalivaDetected but not Quantified Adlit (>18 years old)Both

    Normal

  • Zerihun T. Dame, …
  • details UrineDetected and Quantified> 0.33 umol/mmol creatinineAdlit (>18 years old)FemaleNormal

  • 18230968
  • details UrineDetected and Quantified0.78 +/- 0.45 umol/mmol creatinineAdlit (>18 years old)Both

    Normal

  • 6695847
  • details UrineDetected and Quantified3.1 (0.4-7.5) umol/mmol creatinineAdlit (>18 years old)Both

    Normal

  • 24023812
  • details UrineDetected and Quantified5.975 +/- 2.873 umol/mmol creatinineChildren (1 – 13 years old)Not Specified

    Normal

  • Mordechai, Hien, …
  • details UrineDetected and Quantified> 3.0 umol/mmol creatinineChildren (1-13 years old)BothNormal

  • 12368406
  • details UrineDetected and Quantified2.99 +/- 5.25 umol/mmol creatinineInfant (0-1 year old)BothNormal

  • 2026685
  • details

    Abnormal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details UrineDetected and Quantified5.701 +/- 3.878 umol/mmol creatinineChildren (1 – 13 years old)Not Specified

    Eosinophilic esophagitis

  • Mordechai, Hien, …
  • details UrineDetected and Quantified1414.9 +/- 737.8 umol/mmol creatinineAdlit (>18 years old)Both

    Critically ill

  • 12001008
  • details

    Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB021874 KNApSAcK ID

    Not Available Chemspider ID

    6467 KEGG Compound ID

    C00847 BioCyc ID

    CPD-1112 BiGG ID

    36190 Wikipedia Link

    Not Available NuGOwiki Link

    HMDB00017 Metagene Link

    HMDB00017 METLIN ID

    239 PubChem Compound

    6723 PDB ID

    Not Available ChEBI ID

    17405

    Product: ICA-069673

    References Synthesis Reference Senkuma, Masahiko; Imada, Katsumi; Sato, Masatada. Preparation of 4-pyridoxic acid. Jpn. Kokai Tokkyo Koho (1992), 2 pp. Material Safety Data Sheet (MSDS) Download (PDF) General References
    1. Huang YC, Lan PH, Cheng CH, Lee BJ, Kan MN: Vitamin B6 intakes and status of mechanically ventilated critically ill patients in Taiwan. Eur J Clin Nutr. 2002 May;56(5):387-92. [PubMed:12001008 ]
    2. Kodentsova VM, Vrzhesinskaia OA, Sokolnikov AA, Beketova NA, Spirichev VB: [The effect of riboflavin supply on metabolism of water-soluble vitamins]. Vopr Med Khim. 1993 Sep-Oct;39(5):29-33. [PubMed:8279138 ]
    3. Masse PG, Mahuren JD, Tranchant C, Dosy J: B-6 vitamers and 4-pyridoxic acid in the plasma, erythrocytes, and urine of postmenopausal women. Am J Clin Nutr. 2004 Oct;80(4):946-51. [PubMed:15447904 ]
    4. Huang YC, Chang HH, Huang SC, Cheng CH, Lee BJ, Cheng SY, Su KH: Plasma pyridoxal 5-phosphate is a significant indicator of immune responses in the mechanically ventilated critically ill. Nutrition. 2005 Jul-Aug;21(7-8):779-85. [PubMed:15975484 ]
    5. Ericson KL, Mahuren JD, Zubovic YM, Coburn SP: Use of chlorite to improve HPLC detection of pyridoxal 5-phosphate. J Chromatogr B Analyt Technol Biomed Life Sci. 2005 Sep 5;823(2):218-20. [PubMed:16054880 ]
    6. Driskell JA, Chrisley BM: Plasma B-6 vitamer and plasma and urinary 4-pyridoxic acid concentrations in young women as determined using high performance liquid chromatography. Biomed Chromatogr. 1991 Sep;5(5):198-201. [PubMed:1742549 ]
    7. Chiang EP, Smith DE, Selhub J, Dallal G, Wang YC, Roubenoff R: Inflammation causes tissue-specific depletion of vitamin B6. Arthritis Res Ther. 2005;7(6):R1254-62. Epub 2005 Sep 13. [PubMed:16277678 ]
    8. Rybak ME, Pfeiffer CM: Clinical analysis of vitamin B(6): determination of pyridoxal 5-phosphate and 4-pyridoxic acid in human serum by reversed-phase high-performance liquid chromatography with chlorite postcolumn derivatization. Anal Biochem. 2004 Oct 15;333(2):336-44. [PubMed:15450810 ]
    9. Huang YC, Chang SJ, Chiu YT, Chang HH, Cheng CH: The status of plasma homocysteine and related B-vitamins in healthy young vegetarians and nonvegetarians. Eur J Nutr. 2003 Apr;42(2):84-90. [PubMed:12638029 ]
    10. Midttun O, Hustad S, Solheim E, Schneede J, Ueland PM: Multianalyte quantification of vitamin B6 and B2 species in the nanomolar range in human plasma by liquid chromatography-tandem mass spectrometry. Clin Chem. 2005 Jul;51(7):1206-16. [PubMed:15976101 ]
    11. Chang SJ, Huang YC, Hsiao LJ, Lee YC, Hsuen SY: Determination of vitamin B-6 estimated average requirement and recommended dietary allowance for children aged 7-12 years using vitamin B-6 intake, nutritional status and anthropometry. J Nutr. 2002 Oct;132(10):3130-4. [PubMed:12368406 ]

    Enzymes

    General function:
    Involved in oxidoreductase activity
    Specific function:
    Not Available
    Gene Name:
    AOX1
    Uniprot ID:
    Q06278
    Molecular weight:
    147916.735
    Reactions
    Pyridoxal + Oxygen + Water → 4-Pyridoxic acid + Hydrogen peroxide details
    References
    1. Stanulovic M, Jeremic V, Leskovac V, Chaykin S: New pathway of conversion of pyridoxal to 4-pyridoxic acid. Enzyme. 1976;21(4):357-69. [PubMed:939227 ]

    PMID: 9650825