8-Hydroxyadenine

Common Name

8-Hydroxyadenine Description

8-hydroxyadenine is an intermediate in the oxidation of adenine to 2,8-dihydroxyadenine by xanthine oxidase (EC 1.1.3.22). A controversy exists as to whether or not this metabolite is a marker of DNA damage. Several papers have reported an artifactual formation of a number of modified bases from intact DNA bases during derivatization of DNA hydrolysates to be analyzed by gas chromatography-mass spectrometry (GC/MS). These reports dealt with 8-hydroxyadenine (8-OH). It needs to be emphasized that the procedures for hydrolysis of DNA and derivatization of DNA hydrolysates used in these papers substantially differed from the established procedures previously described. Furthermore, a large number of relevant papers reporting the levels of these modified bases in DNA of various sources have been ignored. Interestingly, the levels of modified bases reported in the literature were not as high as those reported prior to prepurification. Levels of 8-OH-Ade were quite close to, or even the same as, or smaller than the level reported after prepurification. All these facts raise the question of the validity of the claims about the measurement of these modified DNA bases by GC/MS. Oxidative damage to DNA may play an important role in aging and neurodegenerative diseases such as Alzheimers disease (AD). Attack on DNA by reactive oxygen species, particliarly hydroxyl radicals, can lead to strand breaks, DNA-DNA and DNA-protein cross-linking, sister chromatid exchange and translocation, and formation of at least 20 oxidized base adducts. Modification of DNA bases can lead to mutation and altered protein synthesis. In late-stage AD brain, several studies have shown an elevation of the base adducts 8-hydroxyadenine (8-OHA). Several studies have shown a decline in repair of 8-OHG in AD. Most recently studies have shown elevated 8-OHA in nuclear and mitochondrial DNA in mild cognitive impairment, the earliest detectable form of AD, suggesting that oxidative damage to DNA is an early event in AD and not a secondary phenomenon. (PMID: 10098459 , 17034348 ). Structure

Synonyms

Value Source 6-amino-1,7-dihydro-8H-Purin-8-oneHMDB 6-amino-8-HydroxypurineHMDB 6-amino-Purin-8(9H)-oneHMDB 6-amino-Purin-8-olHMDB 7,8-dihydro-8-OxoadenineHMDB 8-Hydroxy-1H-purin-6-amineHMDB 8-oxo-7,8-DihydroadenineHMDB 8-OxoadenineHMDB OksadenHMDB OxadenHMDB OxyadenineHMDB 7,8-DHOAMeSH

Chemical Formlia

C5H5N5O Average Molecliar Weight

151.1261 Monoisotopic Molecliar Weight

151.049409807 IUPAC Name

6-amino-7H-purin-8-ol Traditional Name

6-amino-8-hydroxypurine CAS Registry Number

21149-26-8 SMILES

NC1=NC=NC2=C1NC(O)=N2

InChI Identifier

InChI=1S/C5H5N5O/c6-3-2-4(8-1-7-3)10-5(11)9-2/h1H,(H4,6,7,8,9,10,11)

InChI Key

RGKBRPAAQSHTED-UHFFFAOYSA-N Chemical Taxonomy Description

This compound belongs to the class of chemical entities known as purinones. These are purines in which the purine moiety bears a C=O group. Purine is a bicyclic aromatic compound made up of a pyrimidine ring fused to an imidazole ring. Kingdom

Chemical entities Super Class

Organic compounds Class

Organoheterocyclic compounds Sub Class

Imidazopyrimidines Direct Parent

Purinones Alternative Parents

  • 6-aminopurines
  • Aminopyrimidines and derivatives
  • Primary aromatic amines
  • Imidolactams
  • Imidazoles
  • Heteroaromatic compounds
  • Ureas
  • Azacyclic compounds
  • Organopnictogen compounds
  • Organooxygen compounds
  • Organic oxides
  • Hydrocarbon derivatives
  • Substituents

  • 6-aminopurine
  • Purinone
  • Aminopyrimidine
  • Primary aromatic amine
  • Pyrimidine
  • Imidolactam
  • Azole
  • Imidazole
  • Heteroaromatic compound
  • Urea
  • Azacycle
  • Hydrocarbon derivative
  • Organic oxide
  • Organopnictogen compound
  • Primary amine
  • Organooxygen compound
  • Organonitrogen compound
  • Amine
  • Organic nitrogen compound
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
  • Molecliar Framework

    Aromatic heteropolycyclic compounds External Descriptors

    Not Available Ontology Status

    Expected but not Quantified Origin

  • Endogenous
  • Biofunction

    Not Available Application

    Not Available Cellliar locations

  • Cytoplasm
  • Physical Properties State

    Solid Experimental Properties

    Property Value Reference Melting PointNot AvailableNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility6.58 mg/mLALOGPS logP-0.82ALOGPS logP-0.19ChemAxon logS-1.4ALOGPS pKa (Strongest Acidic)8.89ChemAxon pKa (Strongest Basic)5.11ChemAxon Physiological Charge0ChemAxon Hydrogen Acceptor Count5ChemAxon Hydrogen Donor Count3ChemAxon Polar Surface Area100.71 Å2ChemAxon Rotatable Bond Count0ChemAxon Refractivity39.67 m3·mol-1ChemAxon Polarizability13.45 Å3ChemAxon Number of Rings2ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Not Available Biological Properties Cellliar Locations

  • Cytoplasm
  • Biofluid Locations

    Not Available Tissue Location

    Not Available Pathways

    Not Available Normal Concentrations Not Available Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB022105 KNApSAcK ID

    Not Available Chemspider ID

    4511108 KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB00542 Metagene Link

    HMDB00542 METLIN ID

    5527 PubChem Compound

    5355054 PDB ID

    Not Available ChEBI ID

    351476

    Product: MQAE

    References Synthesis Reference Makarieva, Tatyana N.; Guzii, Alla G.; Dmitrenok, Andrei S.; Dmitrenok, Pavel S.; Krasokhin, Vladimir B.; Stonik, Valentin A. 8-Oxoadenine, 9-methyl-8-oxoadenine, and trihydroxylated sterols from a Far Eastern thorectidae sponge. Natural Product Communications (2006), 1(9), 711-714. Material Safety Data Sheet (MSDS) Not Available General References
    1. Bartlett GR: Metabolism by man of intravenously administered adenine. Transfusion. 1977 Jul-Aug;17(4):367-73. [PubMed:878002 ]
    2. Ravanat JL, Guicherd P, Tuce Z, Cadet J: Simultaneous determination of five oxidative DNA lesions in human urine. Chem Res Toxicol. 1999 Sep;12(9):802-8. [PubMed:10490501 ]
    3. Stillwell WG, Xu HX, Adkins JA, Wishnok JS, Tannenbaum SR: Analysis of methylated and oxidized purines in urine by capillary gas chromatography-mass spectrometry. Chem Res Toxicol. 1989 Mar-Apr;2(2):94-9. [PubMed:2519715 ]
    4. Webb AL, Singh RH, Kennedy MJ, Elsas LJ: Verbal dyspraxia and galactosemia. Pediatr Res. 2003 Mar;53(3):396-402. [PubMed:12595586 ]
    5. WYNGAARDEN JB, DUNN JT: 8-Hydroxyadenine as the intermediate in the oxidation of adenine to 2, 8-dihydroxyadenine by xanthine oxidase. Arch Biochem Biophys. 1957 Jul;70(1):150-6. [PubMed:13445250 ]
    6. Dizdaroglu M: Facts about the artifacts in the measurement of oxidative DNA base damage by gas chromatography-mass spectrometry. Free Radic Res. 1998 Dec;29(6):551-63. [PubMed:10098459 ]
    7. Markesbery WR, Lovell MA: DNA oxidation in Alzheimers disease. Antioxid Redox Signal. 2006 Nov-Dec;8(11-12):2039-45. [PubMed:17034348 ]

    PMID: 25172903