Coproporphyrin III

Common Name

Coproporphyrin III Description

Coproporphyrin III is a porphyrin metabolite arising from heme synthesis. Porphyrins are pigments found in both animal and plant life. Coproporphyrin III is a tetrapyrrole dead-end product from the spontaneous oxidation of the methylene bridges of coproporphynogen, arising from heme synthesis and secreted in feces and urine. Increased levels of coproporphyrins can indicate congenital erythropoietic porphyria or sideroblastic anaemia. Porphyria is a pathological state characterised by abnormalities of porphyrin metabolism and reslits in the excretion of large quantities of porphyrins in the urine and in extreme sensitivity to light. A large number of factors are capable of increasing porphyrin excretion, owing to different and mlitiple causes and etiologies: 1) the main site of the chronic hepatic porphyria disease process concentrates on the liver, 2) a functional and morphologic liver injury is almost regliarly associated with this chronic porphyria, 3) the toxic form due to occupational and environmental exposure takes mainly a subclinical course. Hepatic factors includes disturbance in coproporphyrinogen metabolism, which reslits from inhibition of coproporphyrinogen oxidase as well as from the rapid loss from, and diminished utilization of coproporphyrinogen in the hepatocytes, which may also explain why coproporphyrin, its autoxidation product, predominates physiologically in the urine; decreased biliary excretion of coproporphyrin leading to a compensatory urinary excretion, so that the coproporphyrin ring isomer ratio (1:III) becomes a sensitive index for impaired liver function and intrahepatic cholestasis; and disturbed activity of hepatic uroporphyrinogen decarboxylase. In itself, secondary coproporphyrinuria is not associated with porphyria symptoms of a hepatologic-gastroenterologic, neurologic, or dermatologic order, even though coproporphyrinuria can occur with such symptoms. (PMID: 3327428 ). Structure

Synonyms

Value Source 3,8,13,17-Tetramethylporphyrin-2,7,12,18-tetrapropanoic acidChEBI 3,8,13,17-Tetramethylporphyrin-2,7,12,18-tetrapropanoateGenerator

Chemical Formlia

C36H38N4O8 Average Molecliar Weight

654.7089 Monoisotopic Molecliar Weight

654.268964212 IUPAC Name

3-[10,14,19-tris(2-carboxyethyl)-5,9,15,20-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1(21),2,4,6,8(23),9,11,13,15,17,19-undecaen-4-yl]propanoic acid Traditional Name

coproporphyrin III CAS Registry Number

14643-66-4 SMILES

CC1=C(CCC(O)=O)/C2=C/C3=N/C(=CC4=C(C)C(CCC(O)=O)=C(N4)/C=C4N=C(C=C1/N2)C(C)=C4CCC(O)=O)/C(CCC(O)=O)=C3C

InChI Identifier

InChI=1S/C36H38N4O8/c1-17-21(5-9-33(41)42)29-14-27-19(3)22(6-10-34(43)44)30(39-27)15-28-20(4)24(8-12-36(47)48)32(40-28)16-31-23(7-11-35(45)46)18(2)26(38-31)13-25(17)37-29/h13-16,37,40H,5-12H2,1-4H3,(H,41,42)(H,43,44)(H,45,46)(H,47,48)/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-

InChI Key

JWFCYWSMNRLXLX-UJJXFSCMSA-N Chemical Taxonomy Classification

Not classified Ontology Status

Detected and Quantified Origin

  • Endogenous
  • Biofunction

    Not Available Application

    Not Available Cellliar locations

  • Cytoplasm
  • Mitochondria
  • Physical Properties State

    Solid Experimental Properties

    Property Value Reference Melting PointNot AvailableNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility0.031 mg/mLALOGPS logP2.53ALOGPS logP4.95ChemAxon logS-4.3ALOGPS pKa (Strongest Acidic)3.52ChemAxon pKa (Strongest Basic)5.16ChemAxon Physiological Charge-4ChemAxon Hydrogen Acceptor Count10ChemAxon Hydrogen Donor Count6ChemAxon Polar Surface Area206.56 Å2ChemAxon Rotatable Bond Count12ChemAxon Refractivity176.26 m3·mol-1ChemAxon Polarizability73.93 Å3ChemAxon Number of Rings5ChemAxon Bioavailability0ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, Positivesplash10-00kr-0000059000-ee622066b0f73e50cf91View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, Positivesplash10-00kp-0000094000-ee6c72d818b957fec0b6View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, Positivesplash10-01ot-0000090000-87edb6484e1fd9c98561View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, Negativesplash10-0f79-0000029000-08747adb62bb52441aebView in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, Negativesplash10-052u-1000079000-d36d808ce647034f9109View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, Negativesplash10-052f-7000094000-b86bf714ce0924edc701View in MoNA

    Biological Properties Cellliar Locations

  • Cytoplasm
  • Mitochondria
  • Biofluid Locations

  • Blood
  • Urine
  • Tissue Location

  • Liver
  • Pathways

    Name SMPDB Link KEGG Link Acute Intermittent PorphyriaSMP00344Not Available Congenital Erythropoietic Porphyria (CEP) or Gunther DiseaseSMP00345Not Available Hereditary Coproporphyria (HCP)SMP00342Not Available Porphyria Variegata (PV)SMP00346Not Available Porphyrin MetabolismSMP00024map00860

    Normal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodDetected and Quantified0.006 (0.000 – 0.012) uMAdlit (>18 years old)Not SpecifiedNormal

  • 10638943
  • details UrineDetected and Quantified0.0054 +/- 0.0019 umol/mmol creatinineAdlit (>18 years old)FemaleNormal

  • 18804642
  • details UrineDetected and Quantified0.0051 +/- 0.0014 umol/mmol creatinineAdlit (>18 years old)MaleNormal

  • 18804642
  • details UrineDetected and Quantified0.0094 +/- 0.00013 umol/mmol creatinineAdlit (>18 years old)BothNormal

  • 10905759
  • details

    Abnormal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodDetected and Quantified0.0045 (0.0000 – 0.0090) uMAdlit (>18 years old)Not Specified

    Porphyria

  • 10638943
  • details BloodDetected and Quantified 0.0044 (0.0002 – 0.0087) uMAdlit (>18 years old)Not Specified

    Porphyria

  • 10638943
  • details UrineDetected and Quantified0.012 +/- 0.00013 umol/mmol creatinineAdlit (>18 years old)BothLiver disease

  • 10905759
  • details UrineDetected and Quantified0.005 umol/mmol creatinineAdlit (>18 years old)BothPorphyria cutanea tarda

  • 10905759
  • details UrineDetected and Quantified0.015 +/- 0.00078 umol/mmol creatinineAdlit (>18 years old)BothHereditary coproporphyria

  • 10905759
  • details UrineDetected and Quantified0.043 +/- 0.00019 umol/mmol creatinineAdlit (>18 years old)BothAcute intermittent porphyria

  • 10905759
  • details

    Associated Disorders and Diseases Disease References

    Hereditary coproporphyria

    1. Zuijderhoudt FM, Koehorst SG, Kluitenberg WE, Dorresteijn-de Bok J: On accuracy and precision of a HPLC method for measurement of urine porphyrin concentrations. Clin Chem Lab Med. 2000 Mar;38(3):227-30. [PubMed:10905759 ]

    Liver disease

    1. Zuijderhoudt FM, Koehorst SG, Kluitenberg WE, Dorresteijn-de Bok J: On accuracy and precision of a HPLC method for measurement of urine porphyrin concentrations. Clin Chem Lab Med. 2000 Mar;38(3):227-30. [PubMed:10905759 ]

    Porphyria

    1. Hindmarsh JT, Oliveras L, Greenway DC: Biochemical differentiation of the porphyrias. Clin Biochem. 1999 Nov;32(8):609-19. [PubMed:10638943 ]

    Associated OMIM IDs

  • 121300 (Hereditary coproporphyria)
  • External Links DrugBank ID

    DB04461 DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB005557 KNApSAcK ID

    Not Available Chemspider ID

    16736509 KEGG Compound ID

    C05770 BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB00570 Metagene Link

    HMDB00570 METLIN ID

    5553 PubChem Compound

    Not Available PDB ID

    1R3T ChEBI ID

    27609

    Product: NOD-IN-1

    References Synthesis Reference Minoda, Taiji; Takada, Toshihiro; Horii, Shinichi. Coproporphyrin III. Jpn. Kokai Tokkyo Koho (1979), 3 pp. Material Safety Data Sheet (MSDS) Not Available General References
    1. Doss MO: Porphyrinurias and occupational disease. Ann N Y Acad Sci. 1987;514:204-18. [PubMed:3327428 ]

    Enzymes

    General function:
    Involved in uroporphyrinogen decarboxylase activity
    Specific function:
    Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
    Gene Name:
    UROD
    Uniprot ID:
    P06132
    Molecular weight:
    40786.58
    References
    1. Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [PubMed:17139284 ]
    2. Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [PubMed:17016423 ]
    General function:
    Involved in coproporphyrinogen oxidase activity
    Specific function:
    Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III.
    Gene Name:
    CPOX
    Uniprot ID:
    P36551
    Molecular weight:
    50151.605

    PMID: 10742299