Galactosylhydroxylysine

Common Name

Galactosylhydroxylysine Description

Galactosylhydroxylysine is released during bone resorption and elevated in subjects with metabolic bone loss. Galactosylhydroxylysine is a sensitive and specific marker of bone resorption. (PMID 10222355 ). Structure

Synonyms

Value Source 5-(beta-D-Galactopyranosyloxy)-L-lysineHMDB 5-(beta-delta-Galactopyranosyloxy)-L-lysineHMDB 5-O-beta-D-Galactopyranosylhydroxy-L-lysineHMDB 5-O-beta-delta-Galactopyranosylhydroxy-L-lysineHMDB beta-1-Galactosyl-O-hydroxylysineHMDB Galactopyranosylhydroxy-L-lysineHMDB Galactosyl-delta-hydroxylysineHMDB Hydroxylysine-galactoseHMDB L-5-(beta-D-Galactopyranosyloxy)-lysineHMDB L-5-(beta-delta-Galactopyranosyloxy)-lysineHMDB O-beta-D-Galactopyranosylhydroxy-L-lysineHMDB O-beta-delta-Galactopyranosylhydroxy-L-lysineHMDB Procollagen (5-galactosyloxy)-L-lysineHMDB

Chemical Formlia

C12H24N2O8 Average Molecliar Weight

324.3276 Monoisotopic Molecliar Weight

324.153265754 IUPAC Name

(2S)-6-amino-2-{N-hydroxy[(3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]amino}hexanoic acid Traditional Name

galactosylhydroxylysine CAS Registry Number

32448-36-5 SMILES

NCCCC[C@H](N(O)C1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O)C(O)=O

InChI Identifier

InChI=1S/C12H24N2O8/c13-4-2-1-3-6(12(19)20)14(21)11-10(18)9(17)8(16)7(5-15)22-11/h6-11,15-18,21H,1-5,13H2,(H,19,20)/t6-,7+,8-,9-,10+,11?/m0/s1

InChI Key

RCPOVANIIKXVTB-YPPRVYOWSA-N Chemical Taxonomy Description

This compound belongs to the class of chemical entities known as glycosyl-amino acids. These are compounds consisting of saccharide linked through a glycosyl linkage (O-, N-, or S-) to an amino acid. Kingdom

Chemical entities Super Class

Organic compounds Class

Organic acids and derivatives Sub Class

Carboxylic acids and derivatives Direct Parent

Glycosyl-amino acids Alternative Parents

  • Hexoses
  • N-hydroxyl-alpha-amino acids
  • Glycosylamines
  • Medium-chain fatty acids
  • Amino fatty acids
  • Hydroxy fatty acids
  • Heterocyclic fatty acids
  • Oxanes
  • Secondary alcohols
  • Amino acids
  • Polyols
  • Oxacyclic compounds
  • Carboxylic acids
  • N-organohydroxylamines
  • Monocarboxylic acids and derivatives
  • Hydrocarbon derivatives
  • Monoalkylamines
  • Organic oxides
  • Carbonyl compounds
  • Organopnictogen compounds
  • Primary alcohols
  • Substituents

  • Glycosyl-amino-acid
  • Hexose monosaccharide
  • Glycosyl compound
  • N-glycosyl compound
  • N-hydroxyl-alpha-amino acid
  • Alpha-amino acid or derivatives
  • Medium-chain fatty acid
  • Amino fatty acid
  • Heterocyclic fatty acid
  • Hydroxy fatty acid
  • Monosaccharide
  • Oxane
  • Fatty acyl
  • Fatty acid
  • Secondary alcohol
  • Amino acid
  • Organoheterocyclic compound
  • Polyol
  • Carboxylic acid
  • Oxacycle
  • N-organohydroxylamine
  • Monocarboxylic acid or derivatives
  • Primary amine
  • Primary aliphatic amine
  • Alcohol
  • Organonitrogen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organic oxide
  • Organopnictogen compound
  • Carbonyl group
  • Organic oxygen compound
  • Primary alcohol
  • Organic nitrogen compound
  • Amine
  • Aliphatic heteromonocyclic compound
  • Molecliar Framework

    Aliphatic heteromonocyclic compounds External Descriptors

    Not Available Ontology Status

    Detected and Quantified Origin

  • Endogenous
  • Biofunction

    Not Available Application

    Not Available Cellliar locations

  • Cytoplasm (predicted from logP)
  • Physical Properties State

    Solid Experimental Properties

    Property Value Reference Melting Point257.0 °CNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility63.3 mg/mLALOGPS logP-3ALOGPS logP-5.3ChemAxon logS-0.71ALOGPS pKa (Strongest Acidic)3.91ChemAxon pKa (Strongest Basic)10.2ChemAxon Physiological Charge0ChemAxon Hydrogen Acceptor Count10ChemAxon Hydrogen Donor Count7ChemAxon Polar Surface Area176.94 Å2ChemAxon Rotatable Bond Count8ChemAxon Refractivity72.01 m3·mol-1ChemAxon Polarizability31.73 Å3ChemAxon Number of Rings1ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, NegativeNot Available

    Biological Properties Cellliar Locations

  • Cytoplasm (predicted from logP)
  • Biofluid Locations

  • Blood
  • Urine
  • Tissue Location

  • Blood Platelet
  • Embryo
  • Fetus
  • IMR-90 Cells (Fetal Lung Diploid Fibroblasts)
  • Skin (Clitured Fibroblasts)
  • WI-38 Cells (Fetal Lung Diploid Fibroblasts)
  • Pathways

    Not Available Normal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodDetected and Quantified0.061 +/- 0.008 uMAdlit (>18 years old)BothNormal

  • 10222355
  • details UrineDetected and Quantified1.35 (0.45-2.3) umol/mmol creatinineAdlit (>18 years old)MaleNormal

  • 5472370
  • details

    Abnormal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodDetected and Quantified0.11 +/- 0.01 uMAdlit (>18 years old)BothPagets disease (osteitis deformans)

  • 10222355
  • details UrineDetected and Quantified1.03 +/- 0.48 umol/mmol creatinineAdlit (>18 years old)FemaleOsteoporosis

  • 10457275
  • details UrineDetected and Quantified1.35 +/- 0.82 umol/mmol creatinineAdlit (>18 years old)FemaleOsteoporosis

  • 10457275
  • details

    Associated Disorders and Diseases Disease References

    Osteoporosis

    1. Lo Cascio V, Bertoldo F, Gambaro G, Gasperi E, Furlan F, Colapietro F, Lo Cascio C, Campagnola M: Urinary galactosyl-hydroxylysine in postmenopausal osteoporotic women: A potential marker of bone fragility. J Bone Miner Res. 1999 Aug;14(8):1420-4. [PubMed:10457275 ]

    Pagets disease

    1. Al-Dehaimi AW, Blumsohn A, Eastell R: Serum galactosyl hydroxylysine as a biochemical marker of bone resorption. Clin Chem. 1999 May;45(5):676-81. [PubMed:10222355 ]

    Associated OMIM IDs

  • 602080 (Paget's disease)
  • 166710 (Osteoporosis)
  • External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB011652 KNApSAcK ID

    Not Available Chemspider ID

    17215976 KEGG Compound ID

    C05547 BioCyc ID

    PROCOLLAGEN-5-GALACTOSYLOXY-L-LYSINE BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB00600 Metagene Link

    HMDB00600 METLIN ID

    5576 PubChem Compound

    22833535 PDB ID

    Not Available ChEBI ID

    Not Available

    Product: KPT-8602 (Z-isomer)

    References Synthesis Reference Adamczyk, Maciej; Reddy, Rajarathnam E.; Rege, Sushil D. Synthesis of galactosylhydroxylysine and its analogs. Synthetic Communications (2000), 30(18), 3281-3290. Material Safety Data Sheet (MSDS) Not Available General References
    1. Kelleher PC: Urinary excretion of hydroxyproline, hydroxylysine and hydroxylysine glycosides by patients with Pagets disease of bone and carcinoma with metastases in bone. Clin Chim Acta. 1979 Mar 15;92(3):373-9. [PubMed:436278 ]
    2. Schroder CH, Monnens LA, van Lith-Zanders HM, Trijbels JM, Veerkamp JH: The urinary excretion of total hydroxylysine and its glycosides in normal persons, and in patients suffering from Alports syndrome–contribution of the peptide-bound fraction. Nephron. 1987;47(4):253-7. [PubMed:3696326 ]
    3. Schroder CH, Langeveld JP, van Raay-Selten BH, Trijbels FJ, de Graaf R, Veerkamp JH, Monnens LA: Urinary excretion of hydroxylysine and its glycosides in normal persons of different ages–influence of maturation. Int J Pediatr Nephrol. 1985 Oct-Dec;6(4):239-44. [PubMed:2419268 ]
    4. Schroder CH, Monnens LA, van Lith-Zanders HM, Trijbels JM, Veerkamp JH, Langeveld JP: Urinary excretion of hydroxylysine and its glycosides in Alports syndrome and several other glomerulopathies. Nephron. 1986;44(2):103-7. [PubMed:3774073 ]
    5. Grazioli V, Alfano M, Stenico A, Casari E: Urinary output of hydroxylysine glycosides and pyridinium cross-links in detecting rat bone collagen turnover rate. FEBS Lett. 1996 Jun 17;388(2-3):134-8. [PubMed:8690072 ]
    6. Marabini R, Sirtori P, Chionna R, Barzizza L, Rubinacci A: Galactosylhydroxylysine and pyridinium cross links in monitoring the bone response to hormone replacement therapy. J Endocrinol Invest. 1996 Mar;19(3):154-8. [PubMed:8743280 ]
    7. Leigh SD, Ju HS, Lundgard R, Daniloff GY, Liu V: Development of an immunoassay for urinary galactosylhydroxylysine. J Immunol Methods. 1998 Nov 1;220(1-2):169-78. [PubMed:9839938 ]
    8. Sirtori P, Sosio C, Polo RM, Tenni R, Rubinacci A: A comparative study on biochemical markers of bone collagen breakdown in post-menopausal women. Pharmacol Res. 1997 Sep;36(3):229-35. [PubMed:9367668 ]
    9. LoCascio V, Braga V, Bertoldo F, Bettica P, Pasini AF, Stefani L, Moro L: Effect of bisphosphonate therapy and parathyroidectomy on the urinary excretion of galactosylhydroxylysine in primary hyperparathyroidism. Clin Endocrinol (Oxf). 1994 Jul;41(1):47-51. [PubMed:8050131 ]
    10. Al-Dehaimi AW, Blumsohn A, Eastell R: Serum galactosyl hydroxylysine as a biochemical marker of bone resorption. Clin Chem. 1999 May;45(5):676-81. [PubMed:10222355 ]
    11. Casetta B, Romanello M, Moro L: A rapid and simple method for quantitation of urinary hydroxylysyl glycosides, indicators of collagen turnover, using liquid chromatography/tandem mass spectrometry. Rapid Commun Mass Spectrom. 2000;14(23):2238-41. [PubMed:11114034 ]
    12. Plebani M, Bernardi D, Meneghetti MF, Ujka F, Zaninotto M: Biological variability in assessing the clinical value of biochemical markers of bone turnover. Clin Chim Acta. 2000 Sep;299(1-2):77-86. [PubMed:10900294 ]
    13. (). Moro, L., Romanello, M. Galactosylhydroxylysine and bone metabolism: an updated review. Cells and Materials (1997), 7(4), 329-332. .
    14. (). Kakimoto, Y., Akazawa, Shigenori. Isolation and identification of NG,NG- and NG,N'G-dimethylarginine, N -mono-, di-, and trimethyllysine, and glucosylgalactosyl- and galactosyl- -hydroxylysine from human urine. Journal of Biological Chemistry (1970), 245(21), 5751-8. .

    PMID: 12870835