(R)-3-Hydroxybutyric acid

Common Name

(R)-3-Hydroxybutyric acid Description

(R)-3-Hydroxybutyric acid is a butyric acid substituted with a hydroxyl group in the beta or 3 position. 3-hydroxybutyric acid, or beta-hydroxybutyrate, is involved in the synthesis and degradation of ketone bodies. Like the other ketone bodies (acetoacetate and acetone), levels of beta-hydroxybutyrate are raised in the blood and urine in ketosis. Beta-hydroxybutyrate is a typical partial-degradation product of branched-chain amino acids (primarily valine) released from muscle for hepatic and renal gluconeogenesis This acid is metabolized by 3-hydroxybutyrate dehydrogenase (catalyzes the oxidation of D-3-hydroxybutyrate to form acetoacetate, using NAD+ as an electron acceptor). The enzyme functions in nervous tissues and muscles, enabling the use of circliating hydroxybutyrate as a fuel. In the liver mitochondrial matrix, the enzyme can also catalyze the reverse reaction, a step in ketogenesis. 3-Hydroxybutyric acid is a chiral compound having two enantiomers, D-3-hydroxybutyric acid and L-3-hydroxybutyric acid. In humans, beta-hydroxybutyrate is synthesized in the liver from acetyl-CoA, and can be used as an energy source by the brain when blood glucose is low. It can also be used for the synthesis of biodegradable plastics (Wikipedia). Structure

Synonyms

Value Source (R)-(-)-beta-Hydroxybutyric acidChEBI (R)-3-Hydroxybutanoic acidChEBI 3-D-Hydroxybutyric acidChEBI D-3-Hydroxybutyric acidChEBI (R)-(-)-b-HydroxybutyrateGenerator (R)-(-)-b-Hydroxybutyric acidGenerator (R)-(-)-beta-HydroxybutyrateGenerator (R)-(-)-β-hydroxybutyrateGenerator (R)-(-)-β-hydroxybutyric acidGenerator (R)-3-HydroxybutyrateGenerator (R)-3-HydroxybutanoateGenerator 3-D-HydroxybutyrateGenerator D-3-HydroxybutyrateGenerator 3-delta-HydroxybutyrateHMDB 3-delta-Hydroxybutyric acidHMDB BHIBHMDB D-(-)-3-HydroxybutyrateHMDB D-beta-HydroxybutyrateHMDB delta-(-)-3-HydroxybutyrateHMDB delta-3-HydroxybutyrateHMDB delta-3-Hydroxybutyric acidHMDB delta-beta-HydroxybutyrateHMDB

Chemical Formlia

C4H8O3 Average Molecliar Weight

104.1045 Monoisotopic Molecliar Weight

104.047344122 IUPAC Name

(3R)-3-hydroxybutanoic acid Traditional Name

(-)-3-hydroxybutyric acid CAS Registry Number

625-72-9 SMILES

C[C@@H](O)CC(O)=O

InChI Identifier

InChI=1S/C4H8O3/c1-3(5)2-4(6)7/h3,5H,2H2,1H3,(H,6,7)/t3-/m1/s1

InChI Key

WHBMMWSBFZVSSR-GSVOUGTGSA-N Chemical Taxonomy Description

This compound belongs to the class of chemical entities known as beta hydroxy acids and derivatives. These are compounds containing a carboxylic acid substituted with a hydroxyl group on the C3 carbon atom. Kingdom

Chemical entities Super Class

Organic compounds Class

Organic acids and derivatives Sub Class

Hydroxy acids and derivatives Direct Parent

Beta hydroxy acids and derivatives Alternative Parents

  • Short-chain hydroxy acids and derivatives
  • Fatty acids and conjugates
  • Secondary alcohols
  • Monocarboxylic acids and derivatives
  • Carboxylic acids
  • Organic oxides
  • Hydrocarbon derivatives
  • Carbonyl compounds
  • Substituents

  • Short-chain hydroxy acid
  • Beta-hydroxy acid
  • Fatty acid
  • Secondary alcohol
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Alcohol
  • Aliphatic acyclic compound
  • Molecliar Framework

    Aliphatic acyclic compounds External Descriptors

  • ketone body (CHEBI:17066 )
  • 3-hydroxybutyric acid (CHEBI:17066 )
  • Hydroxy fatty acids (LMFA01050243 )
  • Ontology Status

    Detected and Quantified Origin

  • Endogenous
  • Biofunction

  • Component of Butanoate metabolism
  • Application

    Not Available Cellliar locations

  • Cytoplasm
  • Extracellliar
  • Mitochondria
  • Physical Properties State

    Solid Experimental Properties

    Property Value Reference Melting Point49 – 50 °CNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility539.0 mg/mLALOGPS logP-0.5ALOGPS logP-0.39ChemAxon logS0.71ALOGPS pKa (Strongest Acidic)4.41ChemAxon pKa (Strongest Basic)-2.6ChemAxon Physiological Charge-1ChemAxon Hydrogen Acceptor Count3ChemAxon Hydrogen Donor Count2ChemAxon Polar Surface Area57.53 Å2ChemAxon Rotatable Bond Count2ChemAxon Refractivity23.46 m3·mol-1ChemAxon Polarizability9.96 Å3ChemAxon Number of Rings0ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key LC-MS/MS

    LC-MS/MS Spectrum – Quattro_QQQ 10V, Negative (Annotated)splash10-0a4i-9200000000-4156904e7472b5e97249View in MoNA LC-MS/MS

    LC-MS/MS Spectrum – Quattro_QQQ 25V, Negative (Annotated)splash10-0a4i-9300000000-505ae46abb0c49c78b1eView in MoNA LC-MS/MS

    LC-MS/MS Spectrum – Quattro_QQQ 40V, Negative (Annotated)splash10-0zfr-9600000000-dfed69c37c1a4d794440View in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ (API3000, Applied Biosystems) 10V, Negativesplash10-0udi-1900000000-b34932b6f2ee5bca9697View in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ (API3000, Applied Biosystems) 20V, Negativesplash10-0a4i-9100000000-cdbb3586477ed705b4d7View in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ (API3000, Applied Biosystems) 30V, Negativesplash10-0a4i-9000000000-022ab74e163dd752d054View in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ (API3000, Applied Biosystems) 40V, Negativesplash10-0006-9000000000-18a18150fcc1dfee58cfView in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ (API3000, Applied Biosystems) 50V, Negativesplash10-0006-9000000000-e8d8003bcda8aa818d4eView in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-QQ , negativesplash10-0006-9000000000-187f6a4024ca6e901188View in MoNA LC-MS/MS

    LC-MS/MS Spectrum – LC-ESI-TOF , negativesplash10-0a4i-9100000000-79f60e90c0ce32d976b3View in MoNA 1D NMR

    1H NMR SpectrumNot Available 2D NMR

    [1H,13C] 2D NMR SpectrumNot Available

    Biological Properties Cellliar Locations

  • Cytoplasm
  • Extracellliar
  • Mitochondria
  • Biofluid Locations

  • Blood
  • Cerebrospinal Fluid (CSF)
  • Urine
  • Tissue Location

    Not Available Pathways

    Name SMPDB Link KEGG Link Ketone Body MetabolismSMP00071map00072 Succinyl CoA: 3-ketoacid CoA transferase deficiencySMP00569Not Available

    Normal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodDetected and Quantified36 +/- 20 uMAdlit (>18 years old)BothNormal

  • 415828
  • details BloodDetected and Quantified86 +/- 53 uMAdlit (>18 years old)BothNormal

  • 1220702
  • details BloodDetected and Quantified38 +/- 31 uMAdlit (>18 years old)BothNormal

  • 5032673
  • details Cerebrospinal Fluid (CSF)Detected and Quantified286 (207-365) uMAdlit (>18 years old)BothNormal

  • 15627241
  • details UrineDetected and Quantified3.4 umol/mmol creatinineAdlit (>18 years old)Not SpecifiedNormal

  • 6321058
  • details UrineDetected and Quantified48.0 (0.00-200.0) umol/mmol creatinineAdlit (>18 years old)BothNormal

  • 6321058
  • details UrineDetected and Quantified3.6 (1.3-6.4) umol/mmol creatinineAdlit (>18 years old)BothNormal

  • 24023812
  • details

    Abnormal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodDetected and Quantified1500.0 +/- 100.0 uMChildren (1-13 years old)Both

    Diabetes

  • 18184896
  • details BloodDetected and Quantified7700.0 +/- 300.0 uMChildren (1-13 years old)Both

    Diabetes

  • 18184896
  • details BloodDetected and Quantified1400.0 +/- 100.0 uMAdlit (>18 years old)Both

    Diabetes

  • 18184896
  • details BloodDetected and Quantified7700.0 +/- 200.0 uMAdlit (>18 years old)Both

    Diabetes

  • 18184896
  • details Cerebrospinal Fluid (CSF)Detected and Quantified430 (359-501) uMAdlit (>18 years old)Both

    Meningitis

  • 15627241
  • details Cerebrospinal Fluid (CSF)Detected and Quantified6360 (5350-7370) uMAdlit (>18 years old)Both

    Diabetes

  • 15982426
  • details UrineDetected and Quantified224 umol/mmol creatinineAdlit (>18 years old)BothDiabetes

  • 6321058
  • details

    Associated Disorders and Diseases Disease References

    Diabetes mellitus type 2

    1. Sheikh-Ali M, Karon BS, Basu A, Kudva YC, Mliler LA, Xu J, Schwenk WF, Miles JM: Can serum beta-hydroxybutyrate be used to diagnose diabetic ketoacidosis? Diabetes Care. 2008 Apr;31(4):643-7. doi: 10.2337/dc07-1683. Epub 2008 Jan 9. [PubMed:18184896 ]
    2. Tasker RC, Lutman D, Peters MJ: Hyperventilation in severe diabetic ketoacidosis. Pediatr Crit Care Med. 2005 Jli;6(4):405-11. [PubMed:15982426 ]
    3. Bales JR, Higham DP, Howe I, Nicholson JK, Sadler PJ: Use of high-resolution proton nuclear magnetic resonance spectroscopy for rapid mliti-component analysis of urine. Clin Chem. 1984 Mar;30(3):426-32. [PubMed:6321058 ]

    Meningitis

    1. Subramanian A, Gupta A, Saxena S, Gupta A, Kumar R, Nigam A, Kumar R, Mandal SK, Roy R: Proton MR CSF analysis and a new software as predictors for the differentiation of meningitis in children. NMR Biomed. 2005 Jun;18(4):213-25. [PubMed:15627241 ]

    Associated OMIM IDs

  • 125853 (Diabetes mellitus type 2)
  • External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB021869 KNApSAcK ID

    Not Available Chemspider ID

    83181 KEGG Compound ID

    C01089 BioCyc ID

    CPD-335 BiGG ID

    36784 Wikipedia Link

    Not Available NuGOwiki Link

    HMDB00011 Metagene Link

    HMDB00011 METLIN ID

    Not Available PubChem Compound

    92135 PDB ID

    3HR ChEBI ID

    17066

    Product: Deoxycytidine triphosphate

    References Synthesis Reference Le Sann, Christine; Munoz, Dulce M.; Saunders, Natalie; Simpson, Thomas J.; Smith, David I.; Soulas, Florilene; Watts, Paul; Willis, Christine L. Assembly intermediates in polyketide biosynthesis: enantioselective syntheses of b-hydroxycarbonyl compounds Material Safety Data Sheet (MSDS) Download (PDF) General References
    1. Pan JW, Rothman TL, Behar KL, Stein DT, Hetherington HP: Human brain beta-hydroxybutyrate and lactate increase in fasting-induced ketosis. J Cereb Blood Flow Metab. 2000 Oct;20(10):1502-7. [PubMed:11043913 ]
    2. Pan JW, Telang FW, Lee JH, de Graaf RA, Rothman DL, Stein DT, Hetherington HP: Measurement of beta-hydroxybutyrate in acute hyperketonemia in human brain. J Neurochem. 2001 Nov;79(3):539-44. [PubMed:11701757 ]
    3. Plecko B, Stoeckler-Ipsiroglu S, Schober E, Harrer G, Mlynarik V, Gruber S, Moser E, Moeslinger D, Silgoner H, Ipsiroglu O: Oral beta-hydroxybutyrate supplementation in two patients with hyperinsulinemic hypoglycemia: monitoring of beta-hydroxybutyrate levels in blood and cerebrospinal fluid, and in the brain by in vivo magnetic resonance spectroscopy. Pediatr Res. 2002 Aug;52(2):301-6. [PubMed:12149510 ]
    4. Raunio RP, Leivo PV, Kuusinen AM: Bioluminescent assay of D-3-hydroxybutyrate in serum. J Biolumin Chemilumin. 1986 Jun;1(1):11-4. [PubMed:3503522 ]
    5. (). Bernardi, R. et al., Chem. Commun., 1984, 460, (resoln). .
    6. (). Encyclopedia of Food and Color Additives, (ed. Burdock, G.A.), CRC Press, 1997, 994-995, (Et ester). .
    7. (). Fenaroli's Handbook of Flavor Ingredients, 3rd edn., (ed. Burdock, G.A.), CRC Press, 1995, 1, 238, (Et ester). .
    8. (). Forsyth, W.G.C. et al., Nature (London), 1958, 182, 800, (isol). .
    9. (). Gottschalk, G. et al., Nature (London), 1965, 205, 308. .
    10. (). Krajewski, D. et al., Phytochemistry, 1997, 45, 1627, (ester glucosides). .
    11. (). Levene, P.A. et al., J. Biol. Chem., 1926, 68, 418, (abs config). .
    12. (). Lewis, R.J., Sax's Dangerous Properties of Industrial Materials, 8th edn., Van Nostrand Reinhold, 1992, MEF500 MKP250. .
    13. (). Marchessault, R.H. et al., Makromol. Chem., Macromol. Symp., 1988, 19, 235, (rev, polymers). .
    14. (). Muller, H.-M. et al., Angew. Chem., Int. Ed., 1993, 32, 477, (rev, polymer). .
    15. (). Org. Synth., 1993, 71, 39, (synth, acid, Meester, pmr, ir). .
    16. (). Quang DN, Hashimoto T, Toyota M, Asakawa Y. Occurrence of a high concentration of spider pheromones in the ascomycete fungus Hypoxylon truncatum. J Nat Prod. 2003 Dec;66(12):1613-4.. .
    17. (). Schulz S, Toft S. Identification of a sex pheromone from a spider. Science. 1993 Jun 11;260(5114):1635-7.. .
    18. (). Seebach, D. et al., Helv. Chim. Acta, 1982, 65, 495-503, (esters, synth). .
    19. (). Seebach, D. et al., Helv. Chim. Acta, 1988, 71, 155, (synth, dimer). .
    20. (). Wipf, B. et al., Helv. Chim. Acta, 1983, 66, 485. .

    Enzymes

    General function:
    Involved in oxidoreductase activity
    Specific function:
    Not Available
    Gene Name:
    BDH1
    Uniprot ID:
    Q02338
    Molecular weight:
    38156.77
    Reactions
    (R)-3-Hydroxybutyric acid + NAD → Acetoacetic acid + NADH details (R)-3-Hydroxybutyric acid + NAD → Acetoacetic acid + NADH + Hydrogen Ion details
    General function:
    Involved in oxidoreductase activity
    Specific function:
    Dehydrogenase that mediates the formation of 2,5-dihydroxybenzoic acid (2,5-DHBA), a siderophore that shares structural similarities with bacterial enterobactin and associates with LCN2, thereby playing a key role in iron homeostasis and transport. Also acts as a 3-hydroxybutyrate dehydrogenase (By similarity).
    Gene Name:
    BDH2
    Uniprot ID:
    Q9BUT1
    Molecular weight:
    26723.57
    Reactions
    (R)-3-Hydroxybutyric acid + NAD → Acetoacetic acid + NADH details (R)-3-Hydroxybutyric acid + NAD → Acetoacetic acid + NADH + Hydrogen Ion details
    General function:
    Involved in catalytic activity
    Specific function:
    Not Available
    Gene Name:
    DKFZp434G1411
    Uniprot ID:
    Q9NT06
    Molecular weight:
    16899.1
    References
    1. Gibson KM, Lee CF, Kamali V, Johnston K, Beaudet AL, Craigen WJ, Powell BR, Schwartz R, Tsai MY, Tuchman M: 3-Hydroxy-3-methylglutaryl-CoA lyase deficiency as detected by radiochemical assay in cell extracts by thin-layer chromatography, and identification of three new cases. Clin Chem. 1990 Feb;36(2):297-303. [PubMed:2302772 ]

    PMID: 26384646