Fri. May 17th, 2024
Common Name

Glucosylgalactosyl hydroxylysine Description

Glucosylgalactosyl hydroxylysine is a Glycoside of hydroxylysine. Hydroxylation of lysine is an important post-translational modification of collagen, (PMID 10928217 ) a reaction catalyzed by the enzyme Lysyl hydroxylase (EC 1.14.11.4) forming hydroxylysine in collagens and other proteins with collagen-like amino acid sequences, by the hydroxylation of lysine residues in X-lys-gly sequences. The hydroxylysine residues formed in the lysyl hydroxylase reaction have 2 important functions: first, their hydroxy groups serve as sites of attachment for carbohydrate units, either the monosaccharide galactose or the disaccharide glucosylgalactose; and second, they are essential for the stability of the intermolecliar collagen crosslinks. (OMIM 153454 ). Hydroxylysine-deficient skin collagen is manifested in Ehlers-Danlos syndrome, type VIA, A heritable disorder of connective tissue (PMID 5016372 ). Structure

Synonyms

Value Source 1,2alpha-Glucosylgalactosyl-O-hydroxylysineHMDB 2-O-a-D-Glucopyranosyl-O-b-D-galactopyranosylhydroxylysineHMDB 2-O-alpha-D-Glucopyranosyl-O-beta-D-galactopyranosylhydroxylysineHMDB 2-O-alpha-delta-Glucopyranosyl-O-beta-delta-galactopyranosylhydroxylysineHMDB 5-[O-a-D-Glucopyranosyl-(1->2)-b-D-galactopyranosyloxy]-L-lysineHMDB 5-[O-alpha-D-Glucopyranosyl-(1->2)-beta-D-galactopyranosyloxy]-L-lysineHMDB 5-[O-alpha-delta-Glucopyranosyl-(1->2)-beta-delta-galactopyranosyloxy]-L-lysineHMDB GlucopyranosylgalactopyranosylhydroxylysineHMDB glucosido-Galactosyl-hydroxylysineHMDB Glucosyl galactosyl-D-hydroxylysineHMDB Glucosyl galactosyl-delta-hydroxylysineHMDB GlucosylgalactosylhydroxylysineHMDB Hydroxylysine-galactose-glucoseHMDB Hydroxylysine-glucose-galactoseHMDB L-5-((2-O-alpha-D-Glucopyranosyl-beta-D-galactopyranosyl)oxy)-lysineHMDB L-5-((2-O-alpha-delta-Glucopyranosyl-beta-delta-galactopyranosyl)oxy)-lysineHMDB 1,2 alpha-Glucosylgalactosyl-O-hydroxylysineMeSH

Chemical Formlia

C18H34N2O13 Average Molecliar Weight

486.4682 Monoisotopic Molecliar Weight

486.206089184 IUPAC Name

(2S)-2,6-diamino-5-{[(2R,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-{[(2R,3R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}hexanoic acid Traditional Name

(2S)-2,6-diamino-5-{[(2R,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-{[(2R,3R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}hexanoic acid CAS Registry Number

32448-35-4 SMILES

NCC(CC[C@H](N)C(O)=O)O[C@@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O[C@H]1O[C@H](CO)[C@@H](O)C(O)[C@H]1O

InChI Identifier

InChI=1S/C18H34N2O13/c19-3-6(1-2-7(20)16(28)29)30-18-15(13(26)11(24)9(5-22)32-18)33-17-14(27)12(25)10(23)8(4-21)31-17/h6-15,17-18,21-27H,1-5,19-20H2,(H,28,29)/t6?,7-,8+,9+,10+,11-,12?,13-,14+,15+,17+,18+/m0/s1

InChI Key

UTIRJVJBKWSIOX-SRMFCGEKSA-N Chemical Taxonomy Description

This compound belongs to the class of chemical entities known as fatty acyl glycosides of mono- and disaccharides. These are compounds composed of a mono- or disaccharide moiety linked to one hydroxyl group of a fatty alcohol or of a phosphorylated alcohol (phosphoprenols), a hydroxy fatty acid or to one carboxyl group of a fatty acid (ester linkage) or to an amino alcohol. Kingdom

Chemical entities Super Class

Organic compounds Class

Lipids and lipid-like moleclies Sub Class

Fatty Acyls Direct Parent

Fatty acyl glycosides of mono- and disaccharides Alternative Parents

  • Disaccharides
  • O-glycosyl compounds
  • L-alpha-amino acids
  • Medium-chain fatty acids
  • Amino fatty acids
  • Heterocyclic fatty acids
  • Hydroxy fatty acids
  • Oxanes
  • Amino acids
  • Secondary alcohols
  • Oxacyclic compounds
  • Carboxylic acids
  • Polyols
  • Monocarboxylic acids and derivatives
  • Acetals
  • Organic oxides
  • Carbonyl compounds
  • Hydrocarbon derivatives
  • Monoalkylamines
  • Primary alcohols
  • Organopnictogen compounds
  • Substituents

  • Fatty acyl glycoside of mono- or disaccharide
  • Disaccharide
  • Glycosyl compound
  • O-glycosyl compound
  • Alpha-amino acid
  • Alpha-amino acid or derivatives
  • L-alpha-amino acid
  • Medium-chain fatty acid
  • Amino fatty acid
  • Heterocyclic fatty acid
  • Hydroxy fatty acid
  • Fatty acid
  • Oxane
  • Amino acid or derivatives
  • Amino acid
  • Secondary alcohol
  • Acetal
  • Carboxylic acid derivative
  • Carboxylic acid
  • Oxacycle
  • Organoheterocyclic compound
  • Monocarboxylic acid or derivatives
  • Polyol
  • Organic oxygen compound
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Alcohol
  • Carbonyl group
  • Organic oxide
  • Primary amine
  • Primary alcohol
  • Primary aliphatic amine
  • Amine
  • Organopnictogen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Aliphatic heteromonocyclic compound
  • Molecliar Framework

    Aliphatic heteromonocyclic compounds External Descriptors

    Not Available Ontology Status

    Detected and Quantified Origin

  • Endogenous
  • Biofunction

    Not Available Application

    Not Available Cellliar locations

  • Cytoplasm
  • Physical Properties State

    Solid Experimental Properties

    Property Value Reference Melting PointNot AvailableNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility82.2 mg/mLALOGPS logP-3.6ALOGPS logP-8ChemAxon logS-0.77ALOGPS pKa (Strongest Acidic)1.76ChemAxon pKa (Strongest Basic)9.8ChemAxon Physiological Charge1ChemAxon Hydrogen Acceptor Count15ChemAxon Hydrogen Donor Count10ChemAxon Polar Surface Area267.87 Å2ChemAxon Rotatable Bond Count11ChemAxon Refractivity104 m3·mol-1ChemAxon Polarizability46.51 Å3ChemAxon Number of Rings2ChemAxon Bioavailability0ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, NegativeNot Available

    Biological Properties Cellliar Locations

  • Cytoplasm
  • Biofluid Locations

  • Blood
  • Urine
  • Tissue Location

    Not Available Pathways

    Not Available Normal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodExpected but not Quantified Not AvailableNot Available

    Normal

  • details UrineDetected and Quantified2.26 (1.13-4.75) umol/mmol creatinineAdlit (>18 years old)BothNormal

  • 5472370
  • details

    Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB022130 KNApSAcK ID

    Not Available Chemspider ID

    109059 KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB00585 Metagene Link

    HMDB00585 METLIN ID

    5567 PubChem Compound

    122304 PDB ID

    Not Available ChEBI ID

    Not Available

    Product: 7,4-Di-O-methylapigenin

    References Synthesis Reference Garza, Hector; Bennett, Nelson Jr.; Rodriguez, Gladys P. Improved rapid method for the isolation, purification and identification of collagen glycosides. Journal of Chromatography, A (1996), 732(2), 385-389. Material Safety Data Sheet (MSDS) Not Available General References
    1. Savolainen ER, Kero M, Pihlajaniemi T, Kivirikko KI: Deficiency of galactosylhydroxylysyl glucosyltransferase, an enzyme of collagen synthesis, in a family with dominant epidermolysis bullosa simplex. N Engl J Med. 1981 Jan 22;304(4):197-204. [PubMed:6449670 ]
    2. Kelleher PC: Urinary excretion of hydroxyproline, hydroxylysine and hydroxylysine glycosides by patients with Pagets disease of bone and carcinoma with metastases in bone. Clin Chim Acta. 1979 Mar 15;92(3):373-9. [PubMed:436278 ]
    3. Schroder CH, Monnens LA, van Lith-Zanders HM, Trijbels JM, Veerkamp JH: The urinary excretion of total hydroxylysine and its glycosides in normal persons, and in patients suffering from Alports syndrome–contribution of the peptide-bound fraction. Nephron. 1987;47(4):253-7. [PubMed:3696326 ]
    4. Schroder CH, Langeveld JP, van Raay-Selten BH, Trijbels FJ, de Graaf R, Veerkamp JH, Monnens LA: Urinary excretion of hydroxylysine and its glycosides in normal persons of different ages–influence of maturation. Int J Pediatr Nephrol. 1985 Oct-Dec;6(4):239-44. [PubMed:2419268 ]
    5. Schroder CH, Monnens LA, van Lith-Zanders HM, Trijbels JM, Veerkamp JH, Langeveld JP: Urinary excretion of hydroxylysine and its glycosides in Alports syndrome and several other glomerulopathies. Nephron. 1986;44(2):103-7. [PubMed:3774073 ]
    6. Grazioli V, Alfano M, Stenico A, Casari E: Urinary output of hydroxylysine glycosides and pyridinium cross-links in detecting rat bone collagen turnover rate. FEBS Lett. 1996 Jun 17;388(2-3):134-8. [PubMed:8690072 ]
    7. Ono S, Shimizu N, Imai T, Rodriguez GP: Urinary collagen metabolite excretion in amyotrophic lateral sclerosis. Muscle Nerve. 2001 Jun;24(6):821-5. [PubMed:11360267 ]
    8. Rodriguez GP, Claus-Walker J: Measurement of hydroxylysine glycosides in urine and its application to spinal cord injury. J Chromatogr. 1984 Jun 8;308:65-73. [PubMed:6746836 ]
    9. Szulc P, Seeman E, Delmas PD: Biochemical measurements of bone turnover in children and adolescents. Osteoporos Int. 2000;11(4):281-94. [PubMed:10928217 ]
    10. Pinnell SR, Krane SM, Kenzora JE, Glimcher MJ: A heritable disorder of connective tissue. Hydroxylysine-deficient collagen disease. N Engl J Med. 1972 May 11;286(19):1013-20. [PubMed:5016372 ]
    11. (). Bank, Ruud A., Beekman, B., Tenni, R., TeKoppele, Johan M. Pre-column derivatization method for the measurement of glycosylated hydroxylysines of collagenous proteins. Journal of Chromatography, B: Biomedical Sciences and Applications (1997), 703(1 + 2), 267-272. .
    12. (). Kakimoto, Y., Akazawa, S. Isolation and identification of NG,NG- and NG,N'G-dimethylarginine, N -mono-, di-, and trimethyllysine, and glucosylgalactosyl- and galactosyl- -hydroxylysine from human urine. Journal of Biological Chemistry (1970), 245(21), 5751-8. .

    PMID: 1659286

    Related Post